Dear Osprey Developers,
I hope you are well!
I’ve come across an issue when using OspreyLoad to load TWIX files, both in the command line and in the GUI, and I was hoping you might be able to help me. Our data is from a Siemens Connectom scanner so this could have something to do with it. I tried viewing the .dat file in MATLAB and it looked different to the .dat files from the TWIX example data provided with Osprey - not sure if this is related.
The error message I get is:
>> Osprey Timestamp March 09, 2022 13:05:43 Osprey 1.1.0 OspreyGUI Warning: "/cubric/software/spm.versions/spm12/external/fieldtrip/external/stats/finv.m" not found in path. > In rmpath (line 71) In osp_Toolbox_Check (line 84) In Osprey (line 19) Warning: MATLAB has disabled some advanced graphics rendering features by switching to software OpenGL. For more information, click here. Continue with loading new job, overwriting existing job. /home/sapcm15/gitlab/ALSPAC_analysis/MRS/jobTwix_ALSPAC.m Timestamp March 09, 2022 13:07:26 Osprey 1.1.0 Timestamp March 09, 2022 13:07:27 Osprey 1.1.0 OspreyGUI Timestamp March 09, 2022 13:07:51 Osprey 1.1.0 OspreyLoad Loading raw data from dataset 1 out of 1 total datasets... Software version: VD (!?) Reader version: 1496740353 (UTC: 06-Jun-2017 09:12:33) Scan 1/1, read all mdhs: 65.8 MB read in 1 s ans = 0 single RAID file detected. Software version: VD (!?) Reader version: 1496740353 (UTC: 06-Jun-2017 09:12:33) Scan 1/1, read all mdhs: 4.7 MB read in 0 s ans = 0 single RAID file detected. ... done. Elapsed time 4.856217 seconds Array indices must be positive integers or logical values. Error in OspreyLoad (line 168) for pp = 1:raw.sz(raw.dims.extras) Error in osp_onLoad (line 33) MRSCont = OspreyLoad(MRSCont); Error while evaluating UIControl Callback.
Please let me know if there is anything you need from me.
Thank you so much,