Hi @Helge,
Is there a function in Osprey that will allow me to plot processed spectra overlaid with the model fits saved in an MRSCont
?
Thanks,
Mark
Hi @Helge,
Is there a function in Osprey that will allow me to plot processed spectra overlaid with the model fits saved in an MRSCont
?
Thanks,
Mark
Hi @mmikkel,
There is only the mean overview plot function osp_plotOverviewSpec and the osp_plotFit function. If you want to create a plot that, for example, includes all subjects and fits stacked, I usually write a custom script and use the MRSCont.overview entries to do visualize any model results. For example, MRSCont.overview.Osprey.sort_models_voxel_1.GMean.metab
includes all model results for all subjects, and you could plot any output there (e.g. data, fit, baseline, res)
See also here:
https://osf.io/db5c7
Hope this answers your question.
Helge
That’s great! Thanks!