Dear MRSHub experts,
I’m very new to Osprey and MRS so please forgive any silly mistakes.
I have been trying to upload some DICOM files from a (Siemens) MEGA-PRESS acquisition into the Osprey GUI (have also tried using the command line - [MRSCont] = OspreyLoad(MRSCont) after creating an MRSCont file in the GUI).
I was wondering how long this process would normally take (I started with 240 DICOMs in one subject folder but reduced this to 10 DICOMs to see if it was taking ages because there were so many). Even after reducing the folder to 10 DICOM files, the process ran for 2 hours without opening the spectra in the GUI. There are no example DICOM data in the Github download so I’m unable to compare my jobfile or folder structure with the gold standard.
Importantly, there are no error messages printed in Matlab, so I’m a little lost as to what the issue might be
Would it be possible to please gain access to an example jobfile and dicom data to establish whether this is an error with my data/Matlab setup?
Thanks in advance!
P.S. I am able to open the DICOM files in JMRUI within a few seconds, so I don’t think it is the files per se.